Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| benzoate transporter | BK664_23185 | Not Available | Positive | 5055680 - 5056900 | 41647.3 |
| porin | BK664_23190 | Not Available | Positive | 5056918 - 5058186 | 46147.1 |
| hypothetical protein | BK664_23195 | Not Available | Negative | 5058290 - 5058532 | 8361.97 |
| lysr family transcriptional regulator | BK664_23200 | Not Available | Positive | 5058654 - 5059586 | 34962.9 |
| hypothetical protein | BK664_23205 | Not Available | Positive | 5059663 - 5060352 | 25977.3 |
| hypothetical protein | BK664_23210 | Not Available | Positive | 5060416 - 5060631 | 8016.31 |
| dna gyrase inhibitor yacg | BK664_23215 | Not Available | Negative | 5060635 - 5060835 | 7439.53 |
| dephospho-coa kinase | BK664_23220 | Not Available | Negative | 5060832 - 5061455 | 22983.5 |
| prepilin peptidase | BK664_23225 | Not Available | Negative | 5061452 - 5062324 | 32414.6 |
| type ii secretion system protein f | BK664_23230 | Not Available | Negative | 5062326 - 5063543 | 44282.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
