Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycine oxidase thio | BK664_23085 | Not Available | Positive | 5037400 - 5038500 | 39093.0 |
| sigma-54-dependent fis family transcriptional regulator | BK664_23090 | Not Available | Negative | 5038504 - 5039844 | 49841.1 |
| pas domain-containing sensor histidine kinase | BK664_23095 | Not Available | Negative | 5039847 - 5041436 | 58681.3 |
| hypothetical protein | BK664_23100 | Not Available | Negative | 5041426 - 5041659 | 8708.57 |
| outer membrane protein assembly factor bamd | BK664_23105 | Not Available | Negative | 5041782 - 5042804 | 38473.8 |
| rna pseudouridine synthase | BK664_23110 | Not Available | Positive | 5042956 - 5043918 | 35523.0 |
| multi-copper polyphenol oxidoreductase | BK664_23115 | Not Available | Positive | 5043915 - 5044640 | 25698.6 |
| atp-dependent chaperone clpb | BK664_23120 | Not Available | Positive | 5044771 - 5047335 | 95475.0 |
| Trna-asn | Not Available | Not Available | Positive | 5047652 - 5047727 | Not Available |
| Trna-pro | Not Available | Not Available | Positive | 5047737 - 5047813 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
