Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| signal peptidase ii | BK664_23035 | Not Available | Positive | 5028969 - 5029481 | 19102.4 |
| peptidylprolyl isomerase | BK664_23040 | Not Available | Positive | 5029474 - 5029926 | 16559.7 |
| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | BK664_23045 | Not Available | Positive | 5030089 - 5031036 | 34381.9 |
| general secretion pathway protein gsph | BK664_23050 | Not Available | Negative | 5031005 - 5031562 | 19948.3 |
| general secretion pathway protein gsph | BK664_23055 | Not Available | Positive | 5031694 - 5032167 | 16357.9 |
| type iv pilus modification protein pilv | BK664_23060 | Not Available | Positive | 5032164 - 5032613 | 16141.2 |
| pilus assembly protein pilw | BK664_23065 | Not Available | Positive | 5032610 - 5033353 | 25845.1 |
| pilus assembly protein pilx | BK664_23070 | Not Available | Positive | 5033365 - 5033829 | 16238.9 |
| pilus assembly protein | BK664_23075 | Not Available | Positive | 5033819 - 5036926 | 109210.0 |
| pilus assembly protein | BK664_23080 | Not Available | Positive | 5036942 - 5037343 | 14522.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
