Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nadh dehydrogenase | BK654_10525 | Not Available | Positive | 2439202 - 2439795 | 21944.7 |
| hydroxyacid dehydrogenase | BK654_10530 | Not Available | Negative | 2439982 - 2440914 | 34262.3 |
| hypothetical protein | BK654_10535 | Not Available | Negative | 2441036 - 2441329 | 11299.7 |
| ribonuclease d | BK654_10540 | Not Available | Negative | 2441326 - 2442459 | 42589.4 |
| sam-dependent methyltransferase | BK654_10545 | Not Available | Negative | 2442581 - 2443222 | 23813.8 |
| phosphoethanolamine transferase | BK654_10550 | Not Available | Negative | 2443292 - 2444941 | 61079.0 |
| glutamine synthetase | BK654_10555 | Not Available | Negative | 2445107 - 2446489 | 50775.3 |
| lysr family transcriptional regulator | BK654_10560 | Not Available | Positive | 2447010 - 2447942 | 34877.8 |
| 5-carboxymethyl-2-hydroxymuconate isomerase | BK654_10565 | Not Available | Negative | 2447946 - 2448311 | 13192.0 |
| hypothetical protein | BK654_10570 | Not Available | Positive | 2448651 - 2448842 | 7204.54 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
