Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | BK664_22785 | Not Available | Negative | 4974753 - 4975664 | 33855.7 |
| 4-oxalocrotonate tautomerase | BK664_22790 | Not Available | Positive | 4975798 - 4976004 | 7674.12 |
| duf4160 domain-containing protein | BK664_22795 | Not Available | Positive | 4976218 - 4976646 | 16392.9 |
| hypothetical protein | BK664_22800 | Not Available | Positive | 4976643 - 4977089 | 15804.0 |
| trna (uridine(54)-c5)-methyltransferase trma | BK664_22805 | Not Available | Negative | 4977144 - 4978223 | 40697.6 |
| guanine permease | BK664_22810 | Not Available | Negative | 4978220 - 4979515 | 44873.4 |
| duf4879 domain-containing protein | BK664_22815 | Not Available | Positive | 4979739 - 4980185 | 15734.8 |
| dj-1 family protein | BK664_22820 | Not Available | Positive | 4980252 - 4980803 | 19195.7 |
| addiction module antidote protein, higa family | BK664_22825 | Not Available | Negative | 4980810 - 4981097 | 10672.0 |
| mfs transporter | BK664_22830 | Not Available | Negative | 4981474 - 4982712 | 44020.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
