Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| had family hydrolase | BK664_22735 | Not Available | Positive | 4964158 - 4964751 | 21305.6 |
| hypothetical protein | BK664_22740 | Not Available | Negative | 4964873 - 4965832 | 34672.3 |
| neutral zinc metallopeptidase | BK664_22745 | Not Available | Negative | 4965833 - 4966726 | 31937.7 |
| iclr family transcriptional regulator | BK664_22750 | Not Available | Positive | 4967014 - 4967790 | 28128.8 |
| eama family transporter | BK664_22755 | Not Available | Positive | 4967939 - 4968817 | 31642.8 |
| hypothetical protein | BK664_22760 | Not Available | Negative | 4968863 - 4970203 | 49214.1 |
| 4-hydroxyphenylpyruvate dioxygenase | BK664_22765 | Not Available | Positive | 4970594 - 4972495 | 70017.9 |
| tetr family transcriptional regulator | BK664_22770 | Not Available | Positive | 4972598 - 4973275 | 26137.2 |
| shikimate dehydrogenase | BK664_22775 | Not Available | Negative | 4973312 - 4974166 | 30320.9 |
| type ii 3-dehydroquinate dehydratase | BK664_22780 | Not Available | Negative | 4974172 - 4974612 | 15834.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
