Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter substrate-binding protein | BK664_22685 | Not Available | Positive | 4954861 - 4955619 | 26437.9 |
| nuclease | BK664_22690 | Not Available | Positive | 4955757 - 4956236 | 17589.0 |
| dna polymerase iii subunit epsilon | BK664_22695 | Not Available | Positive | 4956259 - 4956870 | 22574.5 |
| asnc family transcriptional regulator | BK664_22700 | Not Available | Negative | 4957012 - 4957461 | 16296.0 |
| drug/metabolite exporter yeda | BK664_22705 | Not Available | Positive | 4957626 - 4958552 | 32488.5 |
| dead/deah box helicase | BK664_22710 | Not Available | Positive | 4958605 - 4959939 | 48594.4 |
| nad(fad)-utilizing dehydrogenase | BK664_22715 | Not Available | Negative | 4960101 - 4961342 | 43725.1 |
| histone deacetylase | BK664_22720 | Not Available | Negative | 4961624 - 4962544 | 34088.6 |
| gnat family n-acetyltransferase | BK664_22725 | Not Available | Positive | 4962619 - 4963188 | 21437.4 |
| acyl-coa thioesterase ii | BK664_22730 | Not Available | Positive | 4963292 - 4964161 | 32672.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
