Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| polyribonucleotide nucleotidyltransferase | BK664_22635 | Not Available | Negative | 4942482 - 4942901 | 14822.1 |
| atp-dependent helicase hrpb | BK664_22640 | Not Available | Positive | 4943011 - 4945530 | 92432.5 |
| lysr family transcriptional regulator | BK664_22645 | Not Available | Negative | 4945679 - 4946599 | 33752.8 |
| aldehyde dehydrogenase puuc | BK664_22650 | Not Available | Positive | 4946825 - 4948318 | 53780.9 |
| aspartate aminotransferase family protein | BK664_22655 | Not Available | Positive | 4948350 - 4949720 | 50679.9 |
| taurine abc transporter substrate-binding protein | BK664_22660 | Not Available | Positive | 4950108 - 4951094 | 34950.8 |
| nitrate transport permease nrtb | BK664_22665 | Not Available | Positive | 4951104 - 4951907 | 28934.4 |
| sulfonate abc transporter atp-binding protein | BK664_22670 | Not Available | Positive | 4951895 - 4952731 | 30888.5 |
| endonuclease | BK664_22675 | Not Available | Negative | 4952856 - 4953935 | 40543.5 |
| hypothetical protein | BK664_22680 | Not Available | Negative | 4954011 - 4954685 | 25118.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
