Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| serine-type d-ala-d-ala carboxypeptidase | BK664_22485 | Not Available | Positive | 4910730 - 4911887 | 42100.9 |
| hypothetical protein | BK664_22490 | Not Available | Positive | 4911968 - 4912243 | 10128.2 |
| octanoyltransferase | BK664_22495 | Not Available | Positive | 4912243 - 4912890 | 23397.2 |
| lipoyl synthase | BK664_22500 | Not Available | Positive | 4912892 - 4913917 | 38307.6 |
| ld-carboxypeptidase | BK664_22505 | Not Available | Positive | 4914080 - 4915030 | 34146.5 |
| murein transglycosylase | BK664_22510 | Not Available | Negative | 4915148 - 4916470 | 47870.7 |
| lipoyl synthase | BK664_22515 | Not Available | Negative | 4916533 - 4916697 | 6026.14 |
| dna polymerase iii subunit delta | BK664_22520 | Not Available | Negative | 4916796 - 4917833 | 37383.2 |
| hypothetical protein | BK664_22525 | Not Available | Negative | 4917873 - 4918478 | 22204.5 |
| leucine--trna ligase | BK664_22530 | Not Available | Negative | 4918567 - 4921173 | 96904.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
