Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphoesterase | BK664_22435 | Not Available | Negative | 4899878 - 4901194 | 47319.3 |
| 3-methyladenine dna glycosylase | BK664_22440 | Not Available | Negative | 4901434 - 4902132 | 25806.0 |
| glutamate-5-semialdehyde dehydrogenase | BK664_22445 | Not Available | Positive | 4902322 - 4903593 | 45206.4 |
| nicotinic acid mononucleotide adenylyltransferase | BK664_22450 | Not Available | Positive | 4903562 - 4904284 | 26074.4 |
| ribosome silencing factor | BK664_22455 | Not Available | Positive | 4904357 - 4904851 | 18206.7 |
| 23s rrna (pseudouridine(1915)-n(3))-methyltransferase rlmh | BK664_22460 | Not Available | Positive | 4904861 - 4905328 | 17693.5 |
| penicillin-binding protein 2 | BK664_22465 | Not Available | Positive | 4905339 - 4907234 | 70476.4 |
| rod shape-determining protein roda | BK664_22470 | Not Available | Positive | 4907266 - 4908369 | 40095.7 |
| lytic murein transglycosylase b | BK664_22475 | Not Available | Positive | 4908387 - 4909397 | 37661.6 |
| hypothetical protein | BK664_22480 | Not Available | Positive | 4909397 - 4910407 | 36041.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
