Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BK664_22385 | Not Available | Negative | 4886675 - 4888138 | 54528.2 |
| hypothetical protein | BK664_22390 | Not Available | Negative | 4888605 - 4890755 | 80758.6 |
| hypothetical protein | BK664_22395 | Not Available | Positive | 4890898 - 4891131 | 7846.61 |
| hypothetical protein | BK664_22400 | Not Available | Negative | 4891106 - 4894342 | 117221.0 |
| nucleoside-diphosphate sugar epimerase | BK664_22405 | Not Available | Negative | 4894959 - 4895600 | 23660.9 |
| peptidase c13 | BK664_22410 | Not Available | Negative | 4895628 - 4897346 | 62098.2 |
| dehydratase | BK664_22415 | Not Available | Negative | 4897459 - 4897914 | 16890.6 |
| cida/lrga family protein | BK664_22420 | Not Available | Positive | 4898110 - 4898472 | 13072.9 |
| hypothetical protein | BK664_22425 | Not Available | Positive | 4898469 - 4899185 | 25089.8 |
| atp-dependent protease | BK664_22430 | Not Available | Positive | 4899196 - 4899786 | 21619.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
