Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gtp cyclohydrolase ii | BK664_22235 | Not Available | Positive | 4851393 - 4852010 | 22448.1 |
| mfs transporter | BK664_22240 | Not Available | Positive | 4852007 - 4852426 | 15215.2 |
| cobalamin-binding protein | BK664_22245 | Not Available | Positive | 4852426 - 4853226 | 28972.3 |
| tonb-dependent receptor | BK664_22250 | Not Available | Negative | 4853269 - 4855152 | 70636.5 |
| 1-deoxy-d-xylulose-5-phosphate synthase | BK664_22255 | Not Available | Negative | 4855321 - 4857219 | 68393.5 |
| geranyl transferase | BK664_22260 | Not Available | Negative | 4857311 - 4858213 | 32049.2 |
| exodeoxyribonuclease vii small subunit | BK664_22265 | Not Available | Negative | 4858210 - 4858452 | 8848.27 |
| cell filamentation protein fic | BK664_22270 | Not Available | Negative | 4858562 - 4859707 | 42694.6 |
| hypothetical protein | BK664_22275 | Not Available | Positive | 4859986 - 4860777 | 28992.2 |
| duf2138 domain-containing protein | BK664_22280 | Not Available | Positive | 4860815 - 4862527 | 62489.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
