Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BK664_22185 | Not Available | Negative | 4843935 - 4844399 | 16413.0 |
| transcriptional regulator nrdr | BK664_22190 | Not Available | Positive | 4844528 - 4844992 | 17903.6 |
| riboflavin biosynthesis protein ribd | BK664_22195 | Not Available | Positive | 4844989 - 4846122 | 40181.5 |
| riboflavin synthase subunit alpha | BK664_22200 | Not Available | Positive | 4846169 - 4846846 | 23843.5 |
| 3,4-dihydroxy-2-butanone-4-phosphate synthase | BK664_22205 | Not Available | Positive | 4846863 - 4847954 | 39383.8 |
| 6,7-dimethyl-8-ribityllumazine synthase | BK664_22210 | Not Available | Positive | 4848046 - 4848522 | 16451.0 |
| n utilization substance protein b | BK664_22215 | Not Available | Positive | 4848519 - 4849019 | 18818.4 |
| thiamine-phosphate kinase | BK664_22220 | Not Available | Positive | 4849038 - 4850003 | 32889.6 |
| phosphatidylglycerophosphatase a | BK664_22225 | Not Available | Positive | 4850000 - 4850503 | 19353.9 |
| abc transporter substrate-binding protein | BK664_22230 | Not Available | Positive | 4850526 - 4851281 | 28825.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
