Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| iron abc transporter substrate-binding protein | BK664_22135 | Not Available | Positive | 4834753 - 4835763 | 36469.4 |
| iron abc transporter permease | BK664_22140 | Not Available | Positive | 4835763 - 4837328 | 55997.3 |
| outer membrane protein ompw | BK664_22145 | Not Available | Negative | 4837611 - 4838309 | 24657.3 |
| hypothetical protein | BK664_22150 | Not Available | Negative | 4838532 - 4839050 | 18812.7 |
| peptide abc transporter permease | BK664_22155 | Not Available | Negative | 4839062 - 4840327 | 46021.3 |
| methionine abc transporter atp-binding protein | BK664_22160 | Not Available | Negative | 4840329 - 4841039 | 25855.0 |
| zinc-binding protein | BK664_22165 | Not Available | Negative | 4841176 - 4841742 | 20093.8 |
| hypothetical protein | BK664_22170 | Not Available | Positive | 4841878 - 4842219 | 12325.7 |
| thioredoxin | BK664_22175 | Not Available | Negative | 4842235 - 4843107 | 32009.2 |
| protein methyltransferase | BK664_22180 | Not Available | Negative | 4843282 - 4843938 | 24322.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
