Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| urease accessory protein ureg | BK664_21985 | Not Available | Positive | 4799137 - 4799751 | 21849.3 |
| protein hupe | BK664_21990 | Not Available | Positive | 4799787 - 4800359 | 18982.7 |
| n-acylglucosamine 2-epimerase | BK664_21995 | Not Available | Positive | 4800458 - 4801591 | 42615.3 |
| nad(p)-dependent oxidoreductase | BK664_22000 | Not Available | Negative | 4801710 - 4802480 | 27788.3 |
| abc transporter atp-binding protein | BK664_22005 | Not Available | Negative | 4803324 - 4804040 | 26351.2 |
| abc transporter atp-binding protein | BK664_22010 | Not Available | Negative | 4804037 - 4804912 | 32258.4 |
| branched-chain amino acid abc transporter permease | BK664_22015 | Not Available | Negative | 4804909 - 4806192 | 46104.1 |
| branched-chain amino acid abc transporter permease livh | BK664_22020 | Not Available | Negative | 4806196 - 4807110 | 32594.0 |
| branched chain amino acid abc transporter substrate-binding protein | BK664_22025 | Not Available | Negative | 4807283 - 4808416 | 40031.6 |
| fad-dependent oxidoreductase | BK664_22030 | Not Available | Negative | 4808780 - 4810063 | 46416.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
