Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| iron abc transporter substrate-binding protein | BK664_21830 | Not Available | Positive | 4765202 - 4766149 | 34709.7 |
| abc transporter permease | BK664_21835 | Not Available | Positive | 4766146 - 4767156 | 35375.5 |
| urea abc transporter substrate-binding protein | BK664_21840 | Not Available | Positive | 4767460 - 4768725 | 46106.9 |
| urea abc transporter permease subunit urtb | BK664_21845 | Not Available | Positive | 4768887 - 4770389 | 53195.4 |
| urea abc transporter permease subunit urtc | BK664_21850 | Not Available | Positive | 4770389 - 4771468 | 38862.6 |
| urea abc transporter atp-binding protein urtd | BK664_21855 | Not Available | Positive | 4771465 - 4772337 | 31550.9 |
| urea abc transporter atp-binding subunit urte | BK664_21860 | Not Available | Positive | 4772464 - 4773162 | 25472.4 |
| urease accessory protein | BK664_21865 | Not Available | Positive | 4773206 - 4774045 | 30547.7 |
| urease subunit gamma | BK664_21870 | Not Available | Positive | 4774091 - 4774393 | 11038.6 |
| gnat family n-acetyltransferase | BK664_21875 | Not Available | Positive | 4774403 - 4774936 | 19636.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
