Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sam-dependent methyltransferase | BK664_21625 | Not Available | Negative | 4710212 - 4710961 | 28317.2 |
| nucleotide pyrophosphohydrolase | BK664_21630 | Not Available | Negative | 4710961 - 4711263 | 11507.7 |
| hypothetical protein | BK664_21635 | Not Available | Positive | 4711459 - 4711752 | 10675.5 |
| mate family efflux transporter | BK664_21640 | Not Available | Positive | 4711914 - 4713263 | 48516.2 |
| hypothetical protein | BK664_21645 | Not Available | Negative | 4713326 - 4714108 | 29824.7 |
| type vi secretion protein | BK664_21650 | Not Available | Negative | 4714105 - 4715433 | 48952.1 |
| arginine decarboxylase | BK664_21655 | Not Available | Negative | 4715667 - 4717580 | 71126.4 |
| translation initiation factor | BK664_21660 | Not Available | Negative | 4717799 - 4718170 | 12686.5 |
| nudix hydrolase | BK664_21665 | Not Available | Negative | 4718340 - 4718897 | 20515.2 |
| hypothetical protein | BK664_21670 | Not Available | Negative | 4718902 - 4719969 | 39325.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
