Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type vi secretion system-associated lipoprotein | BK664_21525 | Not Available | Positive | 4685467 - 4685967 | 18390.9 |
| type vi secretion system-associated protein | BK664_21530 | Not Available | Positive | 4685970 - 4687301 | 49664.6 |
| hypothetical protein | BK664_21535 | Not Available | Positive | 4687307 - 4688182 | 33105.9 |
| type vi secretion protein vask | BK664_21540 | Not Available | Positive | 4688196 - 4691720 | 133430.0 |
| protein phosphatase | BK664_21545 | Not Available | Positive | 4691720 - 4692448 | 26384.4 |
| serine/threonine protein kinase | BK664_21550 | Not Available | Positive | 4692445 - 4693461 | 37352.1 |
| type iv secretion protein rhs | BK664_21555 | Not Available | Positive | 4693490 - 4695532 | 76707.5 |
| hypothetical protein | BK664_21560 | Not Available | Positive | 4695586 - 4698240 | 97267.4 |
| hypothetical protein | BK664_21565 | Not Available | Positive | 4698222 - 4698812 | 21630.1 |
| hypothetical protein | BK664_21570 | Not Available | Positive | 4699140 - 4700090 | 36211.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
