Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| anti-sigma factor | BK654_10375 | Not Available | Negative | 2408516 - 2408752 | 9369.63 |
| rna polymerase subunit sigma-24 | BK654_10380 | Not Available | Negative | 2408746 - 2409357 | 22862.3 |
| beta-ketoacyl-acp synthase iii | BK654_10385 | Not Available | Negative | 2409546 - 2410667 | 40658.2 |
| atp-dependent rna helicase hrpa | BK654_10390 | Not Available | Negative | 2410997 - 2414908 | 147693.0 |
| bifunctional isocitrate dehydrogenase kinase/phosphatase | BK654_10395 | Not Available | Negative | 2415120 - 2416841 | 66190.8 |
| eama family transporter | BK654_10400 | Not Available | Positive | 2416972 - 2417880 | 32084.6 |
| eama family transporter | BK654_10405 | Not Available | Negative | 2418000 - 2418863 | 31011.9 |
| aspartyl beta-hydroxylase | BK654_10410 | Not Available | Negative | 2419202 - 2420140 | 35768.3 |
| cysteine synthase a | BK654_10415 | Not Available | Negative | 2420320 - 2421294 | 34466.0 |
| hypothetical protein | BK654_10420 | Not Available | Positive | 2421432 - 2422508 | 40685.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
