Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BK664_21475 | Not Available | Positive | 4674874 - 4675380 | 17156.2 |
| hypothetical protein | BK664_21480 | Not Available | Positive | 4675384 - 4676289 | 32486.1 |
| hypothetical protein | BK664_21485 | Not Available | Positive | 4676290 - 4676583 | 11474.2 |
| hypothetical protein | BK664_21490 | Not Available | Positive | 4676570 - 4677037 | 17268.6 |
| type vi secretion protein | BK664_21495 | Not Available | Positive | 4677062 - 4678849 | 67973.9 |
| type vi secretion protein | BK664_21500 | Not Available | Positive | 4678813 - 4679820 | 38594.3 |
| clpv1 family t6ss atpase | BK664_21505 | Not Available | Positive | 4679834 - 4682482 | 96221.7 |
| sigma-54-dependent fis family transcriptional regulator | BK664_21510 | Not Available | Positive | 4682493 - 4684013 | 55594.0 |
| type vi secretion protein | BK664_21515 | Not Available | Positive | 4684107 - 4684247 | 5066.12 |
| hypothetical protein | BK664_21520 | Not Available | Positive | 4684265 - 4685461 | 44559.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
