Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| chorismate--pyruvate lyase | BK664_21425 | Not Available | Negative | 4664829 - 4665392 | 21104.0 |
| rubredoxin | BK664_21430 | Not Available | Positive | 4665592 - 4665762 | 6275.49 |
| fad-dependent oxidoreductase | BK664_21435 | Not Available | Positive | 4665783 - 4666931 | 40265.1 |
| integration host factor | BK664_21440 | Not Available | Positive | 4667124 - 4667399 | 9820.86 |
| glycoside hydrolase 68 family protein | BK664_21445 | Not Available | Positive | 4667822 - 4669096 | 47060.0 |
| hypothetical protein | BK664_21450 | Not Available | Negative | 4669543 - 4669938 | 14165.7 |
| type vi secretion system impa domain-containing protein | BK664_21455 | Not Available | Positive | 4670846 - 4672402 | 58762.7 |
| type vi secretion system-associated protein | BK664_21460 | Not Available | Positive | 4672435 - 4672938 | 18344.1 |
| type vi secretion protein | BK664_21465 | Not Available | Positive | 4672967 - 4674442 | 55665.0 |
| type vi secretion protein | BK664_21470 | Not Available | Positive | 4674456 - 4674863 | 14882.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
