Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gnat family n-acetyltransferase | BK664_21275 | Not Available | Negative | 4627498 - 4627944 | 17035.2 |
| transcriptional regulator | BK664_21280 | Not Available | Negative | 4627954 - 4628577 | 22613.8 |
| gntr family transcriptional regulator | BK664_21285 | Not Available | Positive | 4628668 - 4630218 | 55604.7 |
| hypothetical protein | BK664_21290 | Not Available | Negative | 4630268 - 4634863 | 169723.0 |
| polyamine abc transporter substrate-binding protein | BK664_21295 | Not Available | Negative | 4634988 - 4636088 | 40711.9 |
| acetylpolyamine amidohydrolase | BK664_21300 | Not Available | Negative | 4636101 - 4637132 | 37733.4 |
| arac family transcriptional regulator | BK664_21305 | Not Available | Negative | 4637317 - 4638309 | 36860.1 |
| l-asparaginase 1 | BK664_21310 | Not Available | Negative | 4638479 - 4639483 | 35434.6 |
| sodium:alanine symporter | BK664_21315 | Not Available | Negative | 4639623 - 4641074 | 51979.1 |
| aspartate ammonia-lyase | BK664_21320 | Not Available | Negative | 4641598 - 4643022 | 51192.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
