Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nadh:ubiquinone oxidoreductase | BK664_21175 | Not Available | Negative | 4603327 - 4603683 | 12881.5 |
| cobalamin biosynthesis protein cobw | BK664_21180 | Not Available | Positive | 4603710 - 4604681 | 35094.2 |
| hypothetical protein | BK664_21185 | Not Available | Negative | 4604683 - 4605096 | 15634.0 |
| pyridoxal kinase | BK664_21190 | Not Available | Positive | 4605217 - 4606089 | 31290.9 |
| acyl-coa thioesterase | BK664_21195 | Not Available | Negative | 4606143 - 4606625 | 18074.6 |
| cation/h(+) antiporter | BK664_21200 | Not Available | Positive | 4606916 - 4608679 | 64206.7 |
| cell wall assembly protein | BK664_21205 | Not Available | Negative | 4608701 - 4609108 | 15593.1 |
| hypothetical protein | BK664_21210 | Not Available | Negative | 4609245 - 4610117 | 30817.8 |
| dna helicase ii | BK664_21215 | Not Available | Negative | 4610430 - 4612613 | 81144.6 |
| diguanylate cyclase | BK664_21220 | Not Available | Positive | 4612871 - 4615744 | 107376.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
