Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| f0f1 atp synthase subunit epsilon | BK664_21025 | Not Available | Positive | 4569163 - 4569588 | 14953.0 |
| udp-n-acetylglucosamine diphosphorylase/glucosamine-1-phosphate n-acetyltransferase | BK664_21030 | Not Available | Positive | 4569705 - 4571072 | 48734.4 |
| xre family transcriptional regulator | BK664_21035 | Not Available | Positive | 4571290 - 4572066 | 28386.3 |
| glutamine--fructose-6-phosphate aminotransferase | BK664_21040 | Not Available | Positive | 4572068 - 4573900 | 66538.3 |
| lysr family transcriptional regulator | BK664_21045 | Not Available | Positive | 4573979 - 4574881 | 32411.0 |
| glutathione s-transferase | BK664_21050 | Not Available | Positive | 4575013 - 4575639 | 22408.1 |
| fad-binding oxidoreductase | BK664_21055 | Not Available | Positive | 4575703 - 4577733 | 74204.4 |
| hypothetical protein | BK664_21060 | Not Available | Positive | 4577784 - 4578977 | 43375.8 |
| hypothetical protein | BK664_21065 | Not Available | Positive | 4578964 - 4581084 | 78308.2 |
| lysine transporter lyse | BK664_21070 | Not Available | Negative | 4581085 - 4581726 | 22623.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
