Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methionyl-trna formyltransferase | BK664_20875 | Not Available | Positive | 4536098 - 4537057 | 33949.0 |
| 16s rrna (cytosine(967)-c(5))-methyltransferase | BK664_20880 | Not Available | Positive | 4537054 - 4538364 | 47160.9 |
| trk system potassium transport protein trka | BK664_20885 | Not Available | Positive | 4538387 - 4539760 | 49792.0 |
| hypothetical protein | BK664_20890 | Not Available | Positive | 4539936 - 4540250 | 11753.2 |
| pilus assembly protein pilz | BK664_20895 | Not Available | Negative | 4540251 - 4540490 | 8661.57 |
| lipid a biosynthesis lauroyl acyltransferase | BK664_20900 | Not Available | Negative | 4540563 - 4541450 | 32644.8 |
| 3-methyladenine dna glycosylase | BK664_20905 | Not Available | Negative | 4541491 - 4542048 | 21050.4 |
| glycine--trna ligase subunit alpha | BK664_20910 | Not Available | Positive | 4542130 - 4543083 | 36219.0 |
| glycine--trna ligase subunit beta | BK664_20915 | Not Available | Positive | 4543080 - 4545134 | 74834.6 |
| d-glycero-beta-d-manno-heptose-1,7-bisphosphate 7-phosphatase | BK664_20920 | Not Available | Positive | 4545141 - 4545674 | 18977.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
