Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| choline-sulfatase | BK664_20825 | Not Available | Positive | 4525301 - 4526815 | 57135.8 |
| glycine/betaine abc transporter substrate-binding protein | BK664_20830 | Not Available | Positive | 4526832 - 4527752 | 33226.9 |
| sodium-independent anion transporter | BK664_20835 | Not Available | Positive | 4527943 - 4529511 | 56586.5 |
| shikimate dehydrogenase | BK664_20840 | Not Available | Negative | 4529602 - 4530423 | 29117.0 |
| coproporphyrinogen iii oxidase | BK664_20845 | Not Available | Negative | 4530437 - 4531351 | 34507.2 |
| quinone oxidoreductase | BK664_20850 | Not Available | Positive | 4531515 - 4532492 | 34330.1 |
| threonylcarbamoyl-amp synthase | BK664_20855 | Not Available | Negative | 4532540 - 4533097 | 20658.8 |
| dna protecting protein dpra | BK664_20860 | Not Available | Negative | 4533153 - 4534256 | 38633.7 |
| peptidoglycan-binding protein | BK664_20865 | Not Available | Negative | 4534336 - 4535361 | 37424.1 |
| peptide deformylase | BK664_20870 | Not Available | Positive | 4535534 - 4536040 | 19331.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
