Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | BK664_20775 | Not Available | Negative | 4514491 - 4515639 | 40502.8 |
| hypothetical protein | BK664_20780 | Not Available | Negative | 4515694 - 4516722 | 38549.5 |
| peptidase m16 | BK664_20785 | Not Available | Negative | 4516827 - 4518215 | 51551.6 |
| hypothetical protein | BK664_20790 | Not Available | Negative | 4518411 - 4520069 | 59973.5 |
| hypothetical protein | BK664_20795 | Not Available | Negative | 4520283 - 4521050 | 28473.8 |
| citrate transporter | BK664_20800 | Not Available | Negative | 4521136 - 4522443 | 46506.2 |
| hypothetical protein | BK664_20805 | Not Available | Negative | 4522981 - 4523172 | 6919.52 |
| 4,5-dioxygenase | BK664_20810 | Not Available | Negative | 4523169 - 4523495 | 12269.8 |
| nadh-flavin reductase | BK664_20815 | Not Available | Positive | 4523578 - 4524249 | 23933.9 |
| lysr family transcriptional regulator | BK664_20820 | Not Available | Negative | 4524236 - 4525186 | 35103.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
