Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sigma-54-dependent fis family transcriptional regulator | BK664_20725 | Not Available | Negative | 4504597 - 4505943 | 49600.3 |
| hypothetical protein | BK664_20730 | Not Available | Positive | 4506379 - 4506666 | 10936.1 |
| duf1328 domain-containing protein | BK664_20735 | Not Available | Positive | 4506750 - 4506914 | 5724.41 |
| hypothetical protein | BK664_20740 | Not Available | Positive | 4506917 - 4507381 | 17082.6 |
| glutamate/aspartate:proton symporter gltp | BK664_20745 | Not Available | Positive | 4508078 - 4509409 | 47836.9 |
| hypothetical protein | BK664_20750 | Not Available | Positive | 4509614 - 4510843 | 43118.1 |
| hypothetical protein | BK664_20755 | Not Available | Positive | 4510961 - 4511881 | 33929.9 |
| abc transporter | BK664_20760 | Not Available | Negative | 4512131 - 4512754 | 22545.9 |
| abc transporter permease | BK664_20765 | Not Available | Negative | 4512751 - 4513689 | 33397.2 |
| abc transporter atp-binding protein | BK664_20770 | Not Available | Negative | 4513691 - 4514494 | 28709.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
