Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| metal abc transporter permease | BK664_20625 | Not Available | Negative | 4482053 - 4482748 | 24846.4 |
| methionine abc transporter atp-binding protein | BK664_20630 | Not Available | Negative | 4482748 - 4483755 | 36749.3 |
| catalase hpii | BK664_20635 | Not Available | Positive | 4484019 - 4486157 | 78462.8 |
| hypothetical protein | BK664_20640 | Not Available | Negative | 4486278 - 4486994 | 25743.0 |
| hypothetical protein | BK664_20645 | Not Available | Negative | 4487032 - 4487820 | 27356.9 |
| zinc abc transporter atp-binding protein | BK664_20650 | Not Available | Negative | 4487813 - 4488598 | 28134.2 |
| fur family transcriptional regulator | BK664_20655 | Not Available | Negative | 4488598 - 4489080 | 17348.9 |
| zinc abc transporter substrate-binding protein | BK664_20660 | Not Available | Positive | 4489147 - 4490067 | 33117.7 |
| homoserine kinase | BK664_20665 | Not Available | Negative | 4490170 - 4491120 | 35143.5 |
| hypothetical protein | BK664_20670 | Not Available | Negative | 4491179 - 4491469 | 10845.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
