Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytochrome c oxidase subunit i | BK664_20575 | Not Available | Positive | 4473705 - 4475297 | 58720.0 |
| cytochrome c oxidase assembly protein | BK664_20580 | Not Available | Positive | 4475424 - 4476002 | 21090.6 |
| cytochrome c oxidase subunit 3 | BK664_20585 | Not Available | Positive | 4476015 - 4476902 | 33309.1 |
| mfs transporter | BK664_20590 | Not Available | Negative | 4476906 - 4477109 | 7134.01 |
| cytochrome oxidase biogenesis protein surf1,facilitates heme a insertion | BK664_20595 | Not Available | Positive | 4477180 - 4477920 | 27705.1 |
| hypothetical protein | BK664_20600 | Not Available | Positive | 4477886 - 4478494 | 22253.0 |
| cytochrome b | BK664_20605 | Not Available | Positive | 4478505 - 4479584 | 38921.6 |
| protoheme ix farnesyltransferase | BK664_20610 | Not Available | Positive | 4479572 - 4480471 | 32588.9 |
| cytochrome c oxidase assembly protein | BK664_20615 | Not Available | Positive | 4480468 - 4481103 | 22963.1 |
| methionine abc transporter substrate-binding protein | BK664_20620 | Not Available | Negative | 4481203 - 4481976 | 27698.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
