Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| oligopeptidase a | BK664_20520 | Not Available | Positive | 4460140 - 4462182 | 78211.4 |
| protein tyrosine phosphatase | BK664_20525 | Not Available | Negative | 4462192 - 4462836 | 23490.2 |
| gluconate 2-dehydrogenase | BK664_20530 | Not Available | Positive | 4463138 - 4463878 | 26910.8 |
| alcohol dehydrogenase | BK664_20540 | Not Available | Positive | 4465677 - 4466978 | 46185.4 |
| hypothetical protein | BK664_20545 | Not Available | Negative | 4467082 - 4467387 | 11025.9 |
| radical sam protein | BK664_20550 | Not Available | Positive | 4467619 - 4468677 | 39540.8 |
| carbonate dehydratase | BK664_20555 | Not Available | Positive | 4468921 - 4469652 | 26615.8 |
| sulp family inorganic anion transporter | BK664_20560 | Not Available | Positive | 4469898 - 4471427 | 53343.0 |
| hypothetical protein | BK664_20565 | Not Available | Negative | 4471473 - 4472123 | 23971.5 |
| cytochrome c oxidase subunit ii | BK664_20570 | Not Available | Positive | 4472495 - 4473622 | 42180.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
