Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| integrating conjugative element membrane protein | BK654_00765 | Not Available | Negative | 175744 - 176115 | 13187.6 |
| integrating conjugative element protein | BK654_00770 | Not Available | Negative | 176133 - 176372 | 8499.44 |
| conjugal transfer protein | BK654_00775 | Not Available | Negative | 176369 - 176704 | 12669.9 |
| hypothetical protein | BK654_00780 | Not Available | Positive | 176776 - 177513 | 28177.5 |
| integrating conjugative element membrane protein | BK654_00785 | Not Available | Negative | 178706 - 179437 | 27254.0 |
| conjugative coupling factor trad, pfgi-1 class | BK654_00790 | Not Available | Negative | 179522 - 181627 | 78274.4 |
| conjugal transfer protein | BK654_00795 | Not Available | Negative | 181637 - 182152 | 18748.6 |
| lytic transglycosylase | BK654_00800 | Not Available | Negative | 182149 - 182697 | 19900.9 |
| integrating conjugative element protein | BK654_00805 | Not Available | Negative | 182679 - 183398 | 26543.2 |
| chemotaxis protein | BK654_00810 | Not Available | Negative | 183408 - 184079 | 24632.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
