Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BK664_20470 | Not Available | Negative | 4452162 - 4453163 | 36636.1 |
| osmc family peroxiredoxin | BK664_20475 | Not Available | Positive | 4453405 - 4453836 | 14843.8 |
| hypothetical protein | BK664_20480 | Not Available | Positive | 4453993 - 4454226 | 8394.09 |
| hypothetical protein | BK664_20485 | Not Available | Negative | 4454233 - 4454655 | 15729.1 |
| hypothetical protein | BK664_20490 | Not Available | Negative | 4454696 - 4455118 | 15618.5 |
| aminopeptidase | BK664_20495 | Not Available | Positive | 4455178 - 4456254 | 40730.8 |
| had family hydrolase | BK664_20500 | Not Available | Negative | 4456378 - 4457028 | 24646.3 |
| gamma carbonic anhydrase family protein | BK664_20505 | Not Available | Negative | 4457055 - 4457600 | 19452.7 |
| oligopeptidase a | BK664_20510 | Not Available | Positive | 4457690 - 4459741 | 75589.1 |
| dna-binding protein | BK664_20515 | Not Available | Positive | 4459738 - 4460025 | 10510.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
