Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| holliday junction resolvase | BK664_20420 | Not Available | Positive | 4444767 - 4445084 | 11211.4 |
| hypothetical protein | BK664_20425 | Not Available | Positive | 4445112 - 4445432 | 11273.4 |
| hypothetical protein | BK664_20430 | Not Available | Positive | 4445429 - 4447390 | 73568.8 |
| hypothetical protein | BK664_20435 | Not Available | Negative | 4447441 - 4447896 | 16731.9 |
| tryptophan synthase subunit alpha | BK664_20440 | Not Available | Negative | 4448018 - 4448830 | 28448.1 |
| tryptophan synthase subunit beta | BK664_20445 | Not Available | Negative | 4448830 - 4450050 | 44347.1 |
| lysr family transcriptional regulator | BK664_20450 | Not Available | Positive | 4450163 - 4451056 | 32609.2 |
| hypothetical protein | BK664_20455 | Not Available | Negative | 4451053 - 4451379 | 11889.1 |
| dodecin flavoprotein | BK664_20460 | Not Available | Positive | 4451535 - 4451750 | 7899.31 |
| hypothetical protein | BK664_20465 | Not Available | Positive | 4451873 - 4452097 | 7660.43 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
