Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| quercetin 2,3-dioxygenase | BK664_20310 | Not Available | Positive | 4424969 - 4425691 | 26532.5 |
| lysr family transcriptional regulator | BK664_20315 | Not Available | Negative | 4425792 - 4426667 | 32010.5 |
| hypothetical protein | BK664_20320 | Not Available | Positive | 4426781 - 4427992 | 42333.5 |
| nad(p)h-quinone oxidoreductase | BK664_20325 | Not Available | Positive | 4428051 - 4429049 | 34924.7 |
| deoxyribose-phosphate aldolase | BK664_20330 | Not Available | Negative | 4429050 - 4429733 | 23485.3 |
| deor family transcriptional regulator | BK664_20335 | Not Available | Positive | 4429861 - 4430625 | 28590.2 |
| duf4432 domain-containing protein | BK664_20340 | Not Available | Negative | 4430618 - 4431676 | 39046.3 |
| l-fucose:h+ symporter permease | BK664_20345 | Not Available | Negative | 4431673 - 4433004 | 48455.3 |
| ribokinase | BK664_20350 | Not Available | Negative | 4433059 - 4433985 | 32475.8 |
| alpha/beta hydrolase | BK664_20355 | Not Available | Positive | 4434332 - 4435288 | 35286.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
