Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BK664_20210 | Not Available | Negative | 4397417 - 4403230 | 207653.0 |
| lytic transglycosylase | BK664_20215 | Not Available | Negative | 4403437 - 4404045 | 21763.4 |
| type ii secretion system protein gspg | BK664_20220 | Not Available | Positive | 4404240 - 4404674 | 15852.9 |
| type ii secretion system protein | BK664_20225 | Not Available | Positive | 4404689 - 4405876 | 44378.9 |
| hypothetical protein | BK664_20230 | Not Available | Positive | 4406107 - 4406658 | 18208.7 |
| lysr family transcriptional regulator | BK664_20235 | Not Available | Negative | 4406788 - 4407684 | 33290.4 |
| alpha/beta hydrolase | BK664_20240 | Not Available | Positive | 4407843 - 4408862 | 36330.6 |
| mechanosensitive ion channel protein mscs | BK664_20245 | Not Available | Positive | 4408941 - 4410377 | 51754.5 |
| hydrolase | BK664_20250 | Not Available | Negative | 4410468 - 4411094 | 22885.3 |
| amidohydrolase | BK664_20255 | Not Available | Negative | 4411164 - 4413002 | 67754.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
