Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pilus assembly protein pilo | BK664_20160 | Not Available | Negative | 4387039 - 4387587 | 20269.9 |
| pilus assembly protein | BK664_20165 | Not Available | Negative | 4387574 - 4388119 | 20214.2 |
| hypothetical protein | BK664_20170 | Not Available | Negative | 4388121 - 4388924 | 29301.0 |
| general secretion pathway protein gspe | BK664_20175 | Not Available | Negative | 4388905 - 4390611 | 62549.6 |
| two-component system response regulator | BK664_20180 | Not Available | Negative | 4390696 - 4391229 | 19809.7 |
| peptidylprolyl isomerase | BK664_20185 | Not Available | Negative | 4391452 - 4392405 | 35350.1 |
| branched-chain amino acid abc transporter substrate-binding protein | BK664_20190 | Not Available | Negative | 4392421 - 4393971 | 55368.4 |
| sco family protein | BK664_20195 | Not Available | Negative | 4393981 - 4394619 | 23290.0 |
| sco family protein | BK664_20200 | Not Available | Negative | 4394616 - 4395272 | 23811.3 |
| cytochrome d1 | BK664_20205 | Not Available | Negative | 4395287 - 4397239 | 69776.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
