Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sigma-54-dependent fis family transcriptional regulator | BK664_20060 | Not Available | Negative | 4363002 - 4364432 | 53865.2 |
| two-component sensor histidine kinase | BK664_20065 | Not Available | Negative | 4364401 - 4365894 | 55352.8 |
| electron transporter senc | BK664_20070 | Not Available | Negative | 4365998 - 4367008 | 37717.0 |
| copper oxidase | BK664_20075 | Not Available | Negative | 4367025 - 4369832 | 103449.0 |
| two-component sensor histidine kinase | BK664_20080 | Not Available | Negative | 4370020 - 4371468 | 53140.4 |
| hypothetical protein | BK664_20085 | Not Available | Positive | 4371749 - 4373095 | 46548.8 |
| hypothetical protein | BK664_20090 | Not Available | Positive | 4373131 - 4375374 | 77186.0 |
| curlin | BK664_20095 | Not Available | Positive | 4375435 - 4375896 | 15706.4 |
| curlin | BK664_20100 | Not Available | Positive | 4375924 - 4377303 | 48243.3 |
| hypothetical protein | BK664_20105 | Not Available | Negative | 4377371 - 4377736 | 13343.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
