Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha/beta hydrolase | BK664_19955 | Not Available | Positive | 4339487 - 4340443 | 35817.3 |
| duf1338 domain-containing protein | BK664_19960 | Not Available | Positive | 4340554 - 4341933 | 51522.2 |
| type 1 glutamine amidotransferase domain-containing protein | BK664_19965 | Not Available | Negative | 4342033 - 4342710 | 23984.4 |
| hypothetical protein | BK664_19970 | Not Available | Positive | 4343155 - 4343670 | 19068.2 |
| type iv secretion protein rhs | BK664_19975 | Not Available | Positive | 4343802 - 4345844 | 75910.5 |
| hypothetical protein | BK664_19980 | Not Available | Positive | 4345834 - 4346574 | 28104.3 |
| type iv secretion protein rhs | BK664_19985 | Not Available | Positive | 4346571 - 4351550 | 186111.0 |
| hypothetical protein | BK664_19990 | Not Available | Positive | 4351547 - 4352017 | 18190.5 |
| hypothetical protein | BK664_19995 | Not Available | Positive | 4352079 - 4352549 | 18336.7 |
| hypothetical protein | BK664_20000 | Not Available | Positive | 4352715 - 4353320 | 22976.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
