Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein iolh | BK664_19700 | Not Available | Negative | 4286861 - 4287721 | 32812.0 |
| inositol 2-dehydrogenase | BK664_19705 | Not Available | Negative | 4287858 - 4288868 | 36439.8 |
| 3d-(3,5/4)-trihydroxycyclohexane-1,2-dione acylhydrolase (decyclizing) | BK664_19710 | Not Available | Negative | 4288908 - 4290839 | 70267.0 |
| xylose isomerase | BK664_19715 | Not Available | Negative | 4290988 - 4291809 | 29776.7 |
| methylmalonate-semialdehyde dehydrogenase (acylating) | BK664_19720 | Not Available | Negative | 4291833 - 4293335 | 53728.3 |
| 5-deoxy-glucuronate isomerase | BK664_19725 | Not Available | Negative | 4293379 - 4294188 | 29623.1 |
| myo-inosose-2 dehydratase | BK664_19730 | Not Available | Negative | 4294185 - 4295078 | 32666.0 |
| 5-dehydro-2-deoxygluconokinase | BK664_19735 | Not Available | Negative | 4295247 - 4297184 | 71217.4 |
| rpir family transcriptional regulator | BK664_19740 | Not Available | Positive | 4297495 - 4298415 | 34363.9 |
| glutathione s-transferase | BK664_19745 | Not Available | Positive | 4298492 - 4299103 | 22694.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
