Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sugar abc transporter substrate-binding protein | BK664_19500 | Not Available | Negative | 4245326 - 4246627 | 45903.8 |
| sugar isomerase | BK664_19505 | Not Available | Negative | 4246744 - 4248003 | 46847.7 |
| two-component sensor histidine kinase | BK664_19510 | Not Available | Negative | 4248232 - 4249701 | 54283.0 |
| dna-binding response regulator | BK664_19515 | Not Available | Negative | 4249691 - 4250422 | 27405.8 |
| glucokinase | BK664_19520 | Not Available | Negative | 4250503 - 4251459 | 33536.4 |
| phosphogluconate dehydratase | BK664_19525 | Not Available | Negative | 4251456 - 4253282 | 65229.8 |
| type i glyceraldehyde-3-phosphate dehydrogenase | BK664_19530 | Not Available | Positive | 4253503 - 4254504 | 36182.1 |
| methylglyoxal synthase | BK664_19535 | Not Available | Positive | 4254522 - 4254986 | 17349.0 |
| chemotaxis protein | BK664_19540 | Not Available | Positive | 4255295 - 4257433 | 75806.2 |
| acyl-coa transferase | BK664_19545 | Not Available | Positive | 4257617 - 4258945 | 47685.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
