Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type i secretion target | BK654_10170 | Not Available | Negative | 2344787 - 2351872 | 237248.0 |
| channel protein tolc | BK654_10175 | Not Available | Positive | 2352328 - 2353686 | 50305.8 |
| abc transporter | BK654_10180 | Not Available | Positive | 2353716 - 2355875 | 77871.6 |
| hemolysin secretion protein d | BK654_10185 | Not Available | Positive | 2356083 - 2357447 | 49732.6 |
| dtw domain-containing protein | BK654_10190 | Not Available | Negative | 2357597 - 2358193 | 21777.5 |
| lysr family transcriptional regulator | BK654_10195 | Not Available | Negative | 2358201 - 2359094 | 33297.2 |
| agmatinase | BK654_10200 | Not Available | Positive | 2359428 - 2360378 | 34197.3 |
| duf4440 domain-containing protein | BK654_10205 | Not Available | Positive | 2360388 - 2360813 | 16145.7 |
| nitrate reductase | BK654_10210 | Not Available | Positive | 2360868 - 2362403 | 54097.6 |
| sodium:solute symporter | BK654_10215 | Not Available | Positive | 2362560 - 2363948 | 48733.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
