Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| intradiol ring-cleavage dioxygenase | BK664_19450 | Not Available | Negative | 4234786 - 4235511 | 26913.6 |
| keto-deoxy-phosphogluconate aldolase | BK664_19455 | Not Available | Negative | 4235680 - 4236345 | 23209.5 |
| 6-phosphogluconolactonase | BK664_19460 | Not Available | Negative | 4236363 - 4237076 | 25215.5 |
| glucose-6-phosphate dehydrogenase | BK664_19465 | Not Available | Negative | 4237063 - 4238532 | 55093.1 |
| transcriptional regulator hexr | BK664_19470 | Not Available | Positive | 4238763 - 4239632 | 31649.2 |
| d-hexose-6-phosphate mutarotase | BK664_19475 | Not Available | Negative | 4239823 - 4240680 | 32524.3 |
| porin | BK664_19480 | Not Available | Negative | 4240789 - 4242135 | 49738.6 |
| sugar abc transporter atp-binding protein | BK664_19485 | Not Available | Negative | 4242264 - 4243424 | 42258.7 |
| sugar abc transporter permease | BK664_19490 | Not Available | Negative | 4243427 - 4244272 | 30559.1 |
| sugar abc transporter permease | BK664_19495 | Not Available | Negative | 4244265 - 4245173 | 33845.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
