Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| long-chain fatty acid--coa ligase | BK664_19400 | Not Available | Negative | 4223858 - 4225558 | 61707.5 |
| long-chain fatty acid--coa ligase | BK664_19405 | Not Available | Negative | 4225915 - 4227603 | 61905.5 |
| alpha/beta hydrolase | BK664_19410 | Not Available | Positive | 4227850 - 4228794 | 34623.3 |
| 3-hydroxybutyryl-coa dehydratase | BK664_19415 | Not Available | Positive | 4228835 - 4229305 | 17059.7 |
| efflux transporter periplasmic adaptor subunit | BK664_19420 | Not Available | Negative | 4229445 - 4230308 | 31886.2 |
| transporter | BK664_19425 | Not Available | Negative | 4230319 - 4230525 | 7566.81 |
| fusaric acid resistance protein | BK664_19430 | Not Available | Negative | 4230512 - 4232500 | 72010.7 |
| aldehyde dehydrogenase | BK664_19435 | Not Available | Negative | 4232658 - 4233125 | 17360.4 |
| hypothetical protein | BK664_19440 | Not Available | Positive | 4233329 - 4233565 | 8858.86 |
| class v aminotransferase | BK664_19445 | Not Available | Positive | 4233602 - 4234783 | 44035.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
