Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutathione transferase gsta | BK664_19350 | Not Available | Positive | 4216172 - 4216771 | 22443.0 |
| abc transporter substrate-binding protein | BK664_19355 | Not Available | Negative | 4216810 - 4217823 | 36751.9 |
| rna polymerase subunit sigma | BK664_19360 | Not Available | Negative | 4217820 - 4218362 | 20436.6 |
| phosphate abc transporter substrate-binding protein | BK664_19365 | Not Available | Negative | 4218582 - 4219370 | 29203.0 |
| fatty acid desaturase | BK664_19370 | Not Available | Negative | 4219524 - 4220465 | 36916.8 |
| gnat family n-acetyltransferase | BK664_19375 | Not Available | Positive | 4220814 - 4221293 | 17843.6 |
| peptide deformylase | BK664_19380 | Not Available | Negative | 4221348 - 4221887 | 20043.0 |
| ribonuclease bn | BK664_19385 | Not Available | Negative | 4221884 - 4222840 | 35463.1 |
| csbd family protein | BK664_19390 | Not Available | Negative | 4223011 - 4223202 | 6426.67 |
| hypothetical protein | BK664_19395 | Not Available | Positive | 4223402 - 4223779 | 14425.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
