Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alanine transaminase | BK664_19300 | Not Available | Positive | 4206004 - 4207221 | 44900.2 |
| permease dsdx | BK664_19305 | Not Available | Negative | 4207376 - 4208728 | 47346.2 |
| gluconokinase | BK664_19310 | Not Available | Negative | 4208811 - 4209344 | 19142.9 |
| laci family transcriptional regulator | BK664_19315 | Not Available | Positive | 4209560 - 4210591 | 37300.1 |
| lysr family transcriptional regulator | BK664_19320 | Not Available | Negative | 4210730 - 4211602 | 31660.9 |
| hypothetical protein | BK664_19325 | Not Available | Positive | 4211723 - 4212154 | 16058.0 |
| glutathione s-transferase | BK664_19330 | Not Available | Positive | 4212211 - 4212843 | 23719.3 |
| mfs transporter | BK664_19335 | Not Available | Positive | 4212987 - 4214411 | 52450.3 |
| hypothetical protein | BK664_19340 | Not Available | Positive | 4214577 - 4215131 | 19659.2 |
| lysr family transcriptional regulator | BK664_19345 | Not Available | Negative | 4215176 - 4216072 | 31888.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
