Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fad-dependent oxidoreductase | BK664_19100 | Not Available | Positive | 4168525 - 4169838 | 47348.9 |
| hypothetical protein | BK664_19105 | Not Available | Negative | 4169885 - 4170130 | 9280.09 |
| gntr family transcriptional regulator | BK664_19110 | Not Available | Positive | 4170310 - 4171737 | 52864.2 |
| pilus assembly protein papc | BK664_19115 | Not Available | Negative | 4171745 - 4173982 | 79317.8 |
| fimbrial chaperone protein | BK664_19120 | Not Available | Negative | 4174165 - 4174869 | 25327.8 |
| hypothetical protein | BK664_19125 | Not Available | Negative | 4175044 - 4175694 | 22323.5 |
| phospholipase | BK664_19130 | Not Available | Positive | 4175977 - 4177545 | 58156.4 |
| mfs transporter | BK664_19135 | Not Available | Negative | 4177587 - 4178729 | 40035.4 |
| aldehyde dehydrogenase puuc | BK664_19140 | Not Available | Negative | 4178895 - 4180388 | 53058.5 |
| transcriptional regulator | BK664_19145 | Not Available | Positive | 4180626 - 4180988 | 13621.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
