Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-dependent dna helicase rep | BK664_19050 | Not Available | Positive | 4158387 - 4160396 | 76539.6 |
| xanthine phosphoribosyltransferase | BK664_19055 | Not Available | Positive | 4160453 - 4161025 | 20333.8 |
| acetyl-coa hydrolase | BK664_19060 | Not Available | Negative | 4161154 - 4163076 | 70791.8 |
| cytochrome c | BK664_19065 | Not Available | Negative | 4163211 - 4163627 | 13723.8 |
| xre family transcriptional regulator | BK664_19070 | Not Available | Negative | 4163809 - 4164357 | 20014.1 |
| alanine racemase | BK664_19075 | Not Available | Negative | 4164485 - 4165558 | 38572.9 |
| hypothetical protein | BK664_19080 | Not Available | Negative | 4165658 - 4166011 | 12891.6 |
| d-amino acid dehydrogenase small subunit | BK664_19085 | Not Available | Negative | 4165983 - 4167287 | 47175.8 |
| asnc family transcriptional regulator | BK664_19090 | Not Available | Positive | 4167445 - 4167933 | 18686.8 |
| zinc/iron-chelating domain-containing protein | BK664_19095 | Not Available | Negative | 4168024 - 4168377 | 13124.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
