Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cupin | BK664_18950 | Not Available | Negative | 4137923 - 4138333 | 14623.3 |
| lysr family transcriptional regulator | BK664_18955 | Not Available | Positive | 4138542 - 4139453 | 33925.7 |
| llm class oxidoreductase | BK664_18960 | Not Available | Positive | 4139625 - 4140581 | 35372.9 |
| alkene reductase | BK664_18965 | Not Available | Positive | 4140605 - 4141696 | 38724.6 |
| cupin | BK664_18970 | Not Available | Negative | 4141719 - 4142213 | 17932.8 |
| nitroreductase | BK664_18975 | Not Available | Positive | 4143317 - 4144000 | 25394.2 |
| fmn reductase | BK664_18980 | Not Available | Positive | 4144074 - 4144655 | 20099.3 |
| lysr family transcriptional regulator | BK664_18985 | Not Available | Negative | 4144695 - 4145684 | 36191.8 |
| duf4863 domain-containing protein | BK664_18990 | Not Available | Positive | 4145871 - 4146404 | 19768.2 |
| hypothetical protein | BK664_18995 | Not Available | Positive | 4146411 - 4146953 | 20984.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
