Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ggdef domain-containing protein | BK664_18850 | Not Available | Negative | 4113836 - 4115761 | 71789.5 |
| acyl-coa desaturase | BK664_18855 | Not Available | Positive | 4115909 - 4117093 | 45257.0 |
| diguanylate cyclase | BK664_18860 | Not Available | Positive | 4117325 - 4118314 | 37051.6 |
| is5 family transposase | BK664_18865 | Not Available | Positive | 4118975 - 4120348 | 52171.1 |
| hypothetical protein | BK664_18870 | Not Available | Negative | 4120560 - 4120928 | 13699.4 |
| tryptophan permease | BK664_18875 | Not Available | Negative | 4121498 - 4122766 | 45179.8 |
| indole acetimide hydrolase | BK664_18880 | Not Available | Negative | 4122879 - 4124216 | 48190.4 |
| tryptophan 2-monooxygenase | BK664_18885 | Not Available | Negative | 4124261 - 4125970 | 63430.2 |
| hypothetical protein | BK664_18890 | Not Available | Negative | 4125988 - 4126473 | 18764.4 |
| oxidoreductase | BK664_18895 | Not Available | Negative | 4126451 - 4127755 | 49631.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
